BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029G03LP1|AL429101
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig746 272 6e-73
3x_Contig340 260 3e-69
>3x_Contig746
Length = 3129
Score = 272 bits (137), Expect = 6e-73
Identities = 140/141 (99%)
Strand = Plus / Minus
Query: 1 gatctggattggttccaactccggaaataccctacagcttgacactagaggaaaattggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gatctggattggttccaactccggaaataccctacagcttgacactagaggaaaattggt 82
Query: 61 cgacttctttgtagatagtgcattgaagttcaactcacttgtcggtagtgacgatgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cgacttctttgtagatagtgcattgaagttcaactcacttgtcggtagtgacgatgaaga 22
Query: 121 agacgaggaccatgatgatga 141
|||||||| ||||||||||||
Sbjct: 21 agacgagggccatgatgatga 1
>3x_Contig340
Length = 1690
Score = 260 bits (131), Expect = 3e-69
Identities = 138/139 (99%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 756 atcgatttgtttcgaagacaatattattattagatggcatctacttaaaagagttttgga 815
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1690 atcgatttgtttcgaagaca-tattattattagatggcatctacttaaaagagttttgga 1632
Query: 816 taaataacagcaatgatacaaaagataataaaagggaaaagtaatctttaagtttaaggt 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 taaataacagcaatgatacaaaagataataaaagggaaaagtaatctttaagtttaaggt 1572
Query: 876 attgaatgataaacaagcc 894
|||||||||||||||||||
Sbjct: 1571 attgaatgataaacaagcc 1553
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8674
Number of Sequences: 1807
Number of extensions: 8674
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 2
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)